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Biology News
Getting under the shell of the turtle genome
The genome of the western painted turtle (Chrysemys picta bellii) one of the most widespread, abundant and well-studied turtles in the world, is published this week in Genome Biology. The data show that, like turtles themselves, the rate of genome evolution is extremely slow; turtle genomes evolve at a rate that is about a third that of the human genome and a fifth that of the python, the fastest lineage analyzed.
The genomes of peregrine and saker falcons throw lights on evolution of a predatory lifestyle
In a collaborative study published online in Nature Genetics, researchers from Cardiff University, BGI, International Wildlife Consultants, Ltd., and Abu Dhabi Falcon Hospital, have completed the genome sequencing and analysis of two iconic falcons, the peregrine (Falco peregrinus) and saker (Falco cherrug). The work provides an invaluable resource for the deep understanding of the adaptive evolution in raptors and the genetic basis of their wide distribution.
Detecting circulating tumor cells
About 1 in 4 deaths in the United States are due to cancer, but primary tumors are rarely fatal. Instead, it's when tumors metastasize that cancer becomes so deadly. To help patients and physicians make treatment decisions, teams of researchers have been working on various methods to detect cancer's spread – via the bloodstream – before secondary tumors develop. Now, one team reports a nearly perfect method for separating breast cancer cells from blood. They describe their proof-of-concept device in a paper accepted for publication in Biomicrofluidics, a journal of the American Institute of Physics.
Novel insights into the evolution of protein networks
System-wide networks of proteins are indispensable for organisms. Function and evolution of these networks are among the most fascinating research questions in biology. Bioinformatician Thomas Rattei, University of Vienna, and physicist Hernan Makse, City University New York (CUNY), have reconstructed ancestral protein networks. The results are of high interest not only for evolutionary research but also for the interpretation of genome sequence data. Recently, the researchers published their paper in the renowned journal PLOS ONE.
Mayo Clinic and Illinois researchers develop new sensor for methylated DNA
Collaborators from Mayo-Illinois Alliance for Technology Based Healthcare have developed a new, single molecule test for detecting methylated DNA. Methylation -- the addition of a methyl group of molecules to a DNA strand -- is one of the ways gene expression is regulated. The findings appear in the current issue of Scientific Reports (Nature Publishing Group).
Havoc in biology's most-used human cell line
HeLa cells are the world's most commonly used human cell lines, and have served as a standard for understanding many fundamental biological processes. In a study published today in G3: Genes, Genomes and Genetics online, scientists at the European Molecular Biology Laboratory in Heidelberg, announce they have successfully sequenced the genome of a HeLa cell line. It provides a high-resolution genomic reference that reveals the striking differences between the HeLa genome and that of normal human cells. The study could improve the way HeLa cells are used to model human biology.
Neural 'synchrony' may be key to understanding how the human brain perceives
Despite many remarkable discoveries in the field of neuroscience during the past several decades, researchers have not been able to fully crack the brain's "neural code." The neural code details how the brain's roughly 100 billion neurons turn raw sensory inputs into information we can use to see, hear and feel things in our environment.
Organizing enzymes to create electricity
An assistant professor at the University of California, Riverside's Bourns College of Engineering has recently received a $360,000 grant to better organize enzymes on electrodes to create nanoscale devices that more efficiently convert the chemical energy of sugars and complex carbohydrates in to electricity.
New report confirms almost half of Africa's lions facing extinction
This shows lions in Phinda Private Game Reserve, South Africa.
A new report published today concludes that nearly half of Africa's wild lion populations may decline to near extinction over the next 20-40 years without urgent conservation measures. The plight of many lion populations is so bleak, the report concludes that fencing them in - and fencing humans out - may be their only hope for survival.
Spinal tap -- using cactus spines to isolate DNA
Isolation of DNA from some organisms is a routine procedure. For example, you can buy a kit at your local pharmacy or grocery store that allows you to swab the inside of your cheek and send the sample for DNA sequencing. However, for other organisms, DNA extraction is much more problematic. Researchers at Desert Botanical Garden in Phoenix, Arizona, have developed a novel procedure that greatly simplifies genomic DNA isolation from cactus tissue.
Toddler 'functionally cured' of HIV infection, NIH-supported investigators report
A two-year-old child born with HIV infection and treated with antiretroviral drugs beginning in the first days of life no longer has detectable levels of virus using conventional testing despite not taking HIV medication for 10 months, according to findings presented today at the Conference on Retroviruses and Opportunistic Infections (CROI) in Atlanta.
International consortium builds 'Google Map' of human metabolism
An international consortium of university researchers has produced the most comprehensive virtual reconstruction of human metabolism to date. Building on earlier pioneering work by researchers at the University of California, San Diego, an international consortium of university researchers has produced the most comprehensive virtual reconstruction of human metabolism to date. Scientists could use the model, known as Recon 2, to identify causes of and new treatments for diseases like cancer, diabetes and even psychiatric and neurodegenerative disorders. Each person's metabolism, which represents the conversion of food sources into energy and the assembly of molecules, is determined by genetics, environment and nutrition.
Reading the human genome
Eva Nogales and Yuan He used cryo-electron microscopy to record how a complex of biomolecules is able to read the human genome one gene at a time. Researchers with the U.S. Department of Energy (DOE)'s Lawrence Berkeley National Laboratory (Berkeley Lab) have achieved a major advance in understanding how genetic information is transcribed from DNA to RNA by providing the first step-by-step look at the biomolecular machinery that reads the human genome.
