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Results 411 - 420 of at least 637
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PHIRE (Phage In Silico Regulatory Elements)
The PHIRE program, a standalone program in Visual Basic, performs an algorithmic string-based search on bacteriophage genome sequences, discovering and extracting blocks displaying sequence similarity, corresponding to conserved regulatory elements contained within these genomes in a systematic manner, without any prior experimental or predictive knowledge
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PHYLIP
phylogeny inference package
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PHYLTEST
software allows a comparison of phylogenic trees, estimation of the pairwise distances, relative rate tests, and computation of the time of divergence - Indiana University
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PIRATE
Prediction Informatics Resources at TIGR & Elsewhere - this is a repository for gene finders and other bioinformatics prediction software developed by TIGR and its collaborators. Included are full source code for all TIGR gene-finders as well as C++ class libraries and other components for prediction and machine learning tasks
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PIST
an application for running the informative-sites test, a method for detecting recombination from gene sequence data sets
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PLATO - Partial Likelihoods Assessed Through Optimisation
this program takes sequential PHYLIP formatted DNA sequences followed by their maximum likelihood phylogeny. Using a likelihood approach with sliding window analysis and Monte Carlo simulation of the null distribution, anomalously evolving regions in the DNA sequences can be detected and their significance assessed - University of Oxford
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PLabel : Herbarium Label Program
The PLabel program is designed to facilitate plant specimen label generation in a stand-alone setting. The program is self-contained and runs on a variety of host PC's. This allows, for example, students to use the program to create mini-databases and labels for their collecting projects without being tied into one single large collections database. The information from these mini-databases may then be selectively filtered, parsed and dumped into a larger collections database once specimens are accessioned. PLabel is not designed to be a collections cataloguing database - University of Florida Herbarium
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POWER
computes the power of between-model likelihood ratio tests
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POY (Phylogenetic Analysis of DNA and other Data using Dynamic Homology)
downloadable software - American Museum of Natural History
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PPG : the Protein Picture Generator
The Protein Picture Generator (PPG) is a tool for making pictures (and animations) of protein structures from PDB files
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organizations.
For basic answers to who's who in the Animal Kingdom.