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Results 591 - 600 of at least 637
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TransTerm
this is a program that finds rho-independent transcription terminators in bacterial genomes. Each terminator found by the program is assigned a confidence value that provides an estimate of its probability of being a true terminator. TransTerm runs under Unix and requires about ten minutes per megabase of input sequence on 550 MHz Intel processor. The computational time requirement scales linearly with genome size
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Tree Ring Analysis Software
downloadable software links - Laboratory of Tree-Ring Research, University of Arizona
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TreeBASE
a relational database to manage and explore information on phylogenetic relationships, its main function is to store published phylogenetic trees and data matrices, it also includes bibliographic information on phylogenetic studies, taxa, characters, algorithms used, and analyses performed, allows retrieval and recombination of trees and data from different studies, and can be explored interactively using trees included in the database, it provides a means of assessing and synthesizing phylogenetic knowledge
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TreeCons
This program facilitates three purposes in conjunction with maximum likelihood analysis of phylogenetic trees and the assessment of these by means of a Kishino-Hasegawa test - Australian National University (web archive site)
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TreeEdit
an application for organising, viewing, and manipulating sets of phylogenetic trees
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TreeGraph
software for gGenerating complex PostScript- and SVG trees using an extensible tree description format
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TreeMap
a Macintosh program that performs cophylogeny mapping from a dependent evolutionary tree (e.g., a group of parasites) into an independent one (e.g., the hosts of those parasites), in order to recover the best possible coevolutionary explanation for the relationship between the two
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TreeThief
an application for inputting phylogenetic trees, with branch lengths, into the computer for use in programs like PAUP
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TreeView
this software allows you to graphically browse results of clustering and other analyses - Eisen Lab Stanford University
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TreeView
tree drawing software for Apple Macintosh and Windows
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